Hi
Is it a ZDG 3 Unit your using or the Reg/Rec unit with the ZDG 3 in built to it?
I'm asking as I don't know about the later units
The ZDG 3 system uses 2 optical sensors triggered by a disc mounted onto the crank nose, so it has a distinct channel for each cylinder and the cylinder gets the wasted spark on its exhaust stroke not like some of the dangerous units that have the wasted spark triggering when the opposite cylinder requires a spark.
I don't know about the dual output coils, I'm assuming this is to support the dual plugged heads, I can't see why not as the unit has 3 built in ignition curves for dual plugged heads
According to the instruction sheet I have, coil Primary that the unit can support if between 3-8 Ohms, Secondary 4.5-15kOhm.
Plugs should have 5 kOhm resitance (normal for Guzzis)
Personally I'd use a 5 Ohm primary for the coil, I believe that's what is on mine (although it's not dual plugged), Guzzis don't need a 3 Ohm coil and they just produce more heat and more current.
Below is a drop box link with the instructions for the Reg/Rec system and the ZDG3 stand alone
https://www.dropbox.com/sh/szjdkyektutdjzq/AAA4SBFdtRA0mEv8VeJXnYd9a?dl=0John