I'm rebuilding the transmission for the new to me eldorado. The transmission came in several boxes and baggies that yielded "spares". I've shimmed the drum, replaced bearings and seals, and bolted up the rear cover. The transmission binds as I rotate the input hub or output shaft, even in neutral. I'm thinking that the problem is a misalignment between the rear cover and the case. The rear cover does not bolt down easily and becomes a VERY tight fit at the bearing for the output shaft that splines to the drive shaft. I have tried several good bearings there and they test fit well on the shaft out of the box but become very tight when the trans is reassembled. The problem occurs as I fit the rear cover to the transmission with all shafts installed. As well, some distortion is occurring in the output shaft or bearing during refitting because the output shaft bearing in the rear cover that slid on its shaft easily in a test fitting now binds in subsequent test fittings.
One of the alignment dowels pulled from the case when I removed the cover. This occurred several times and the cover refit the case more readily without the dowel.
I have read that some early transmissions had alignment issues but a search here did not get me to any posts. Is what I describe an alignment issue between cover and box, or elsewhere, and how crucial are these alignment pins?
Any thoughts and thanks in advance.
Harry