New Moto Guzzi Door Mats Available Now
... but forgetting to install them can make for a longer brake stroke and different feel.
Pistons retract by the amount the seals spring back when the pressure is released at best, so putting a shim in there would change only the position the piston likes to sit in, not how much free travel there is. Of course if the shims were made non-flat or otherwise has springiness built in, then that would certainly change the lever feel.
You didn't state the mileage on your 2007 Nevada, so I can't tell if the installed pads are original.
From what you have described, I would check that the rear brakes are releasing after use. Then like Tom says I would think about testing out how much brake force you are using on your brakes. Maybe the rears are doing more work than you are realizing. Using both brakes together properly will give you maximum braking and I find you only get close to that from continuously practicing. Mike